Sync the static Doxyfile with Doxyfile.cmake

Still missing is the integration of the generated fluidsettings.txt,
as that requires a build script currently not available on the
server generating the public API docs.

doc/Doxyfile

@@ -11,7 +11,7 @@ CREATE_SUBDIRS = NO
 OUTPUT_LANGUAGE = English
 BRIEF_MEMBER_DESC = YES
 REPEAT_BRIEF = YES
-ABBREVIATE_BRIEF = "The $name class" "The $name widget" "The $name file" is provides specifies contains represents a an the
+ABBREVIATE_BRIEF = "Functions for" "Functions to" "The $name class" "The $name widget" "The $name file" is provides specifies contains represents a an the
 ALWAYS_DETAILED_SEC = NO
 INLINE_INHERITED_MEMB = NO
 FULL_PATH_NAMES = NO
@@ -24,7 +24,9 @@ MULTILINE_CPP_IS_BRIEF = NO
 INHERIT_DOCS = YES
 SEPARATE_MEMBER_PAGES = NO
 TAB_SIZE = 8
-ALIASES = 
+ALIASES += startlifecycle{1}="\name Lifecycle Functions for \1\n@{"
+ALIASES += startlifecycle="\name Lifecycle Functions\n@{"
+ALIASES += endlifecycle="@}"
 OPTIMIZE_OUTPUT_FOR_C = YES
 OPTIMIZE_OUTPUT_JAVA = NO
 OPTIMIZE_FOR_FORTRAN = NO
@@ -34,7 +36,7 @@ CPP_CLI_SUPPORT = NO
 SIP_SUPPORT = NO
 IDL_PROPERTY_SUPPORT = YES
 DISTRIBUTE_GROUP_DOC = NO
-SUBGROUPING = NO
+SUBGROUPING = YES
 TYPEDEF_HIDES_STRUCT = NO
 #---------------------------------------------------------------------------
 # Build related configuration options
@@ -54,9 +56,9 @@ CASE_SENSE_NAMES = YES
 HIDE_SCOPE_NAMES = NO
 SHOW_INCLUDE_FILES = NO
 INLINE_INFO = YES
-SORT_MEMBER_DOCS = NO
-SORT_BRIEF_DOCS = NO
-SORT_GROUP_NAMES = NO
+SORT_MEMBER_DOCS = YES
+SORT_BRIEF_DOCS = YES
+SORT_GROUP_NAMES = YES
 SORT_BY_SCOPE_NAME = NO
 GENERATE_TODOLIST = NO
 GENERATE_TESTLIST = NO
@@ -69,6 +71,7 @@ SHOW_DIRECTORIES = NO
 SHOW_FILES = YES
 SHOW_NAMESPACES = YES
 FILE_VERSION_FILTER = 
+LAYOUT_FILE = ../doc/doxygen/layout.xml
 #---------------------------------------------------------------------------
 # configuration options related to warning and progress messages
 #---------------------------------------------------------------------------
@@ -103,8 +106,8 @@ FILTER_SOURCE_FILES = NO
 SOURCE_BROWSER = NO
 INLINE_SOURCES = NO
 STRIP_CODE_COMMENTS = YES
-REFERENCED_BY_RELATION = YES
-REFERENCES_RELATION = YES
+REFERENCED_BY_RELATION = NO
+REFERENCES_RELATION = NO
 REFERENCES_LINK_SOURCE = YES
 USE_HTAGS = NO
 VERBATIM_HEADERS = NO
@@ -121,8 +124,8 @@ GENERATE_HTML = YES
 HTML_OUTPUT = html
 HTML_FILE_EXTENSION = .html
 HTML_HEADER = 
-HTML_FOOTER = 
-HTML_EXTRA_STYLESHEET = ../doc/doxy_formula.css
+HTML_FOOTER = ../doc/doxygen/footer.html
+HTML_EXTRA_STYLESHEET = ../doc/doxygen/custom.css
 HTML_ALIGN_MEMBERS = YES
 HTML_EXTRA_FILES = ../doc/fluidsettings.xml ../doc/fluidsettings.xsl ../doc/FluidMixer.pdf ../doc/FluidMixer.jpg
 GENERATE_HTMLHELP = NO
@@ -137,9 +140,9 @@ CHM_INDEX_ENCODING =
 BINARY_TOC = NO
 TOC_EXPAND = NO
 DISABLE_INDEX = NO
-ENUM_VALUES_PER_LINE = 4
-GENERATE_TREEVIEW = NO
-TREEVIEW_WIDTH = 250
+ENUM_VALUES_PER_LINE = 1
+GENERATE_TREEVIEW = YES
+TREEVIEW_WIDTH = 350
 FORMULA_FONTSIZE = 10
 #---------------------------------------------------------------------------
 # configuration options related to the LaTeX output
@@ -195,12 +198,14 @@ PERLMOD_MAKEVAR_PREFIX =
 # Configuration options related to the preprocessor   
 #---------------------------------------------------------------------------
 ENABLE_PREPROCESSING = YES
-MACRO_EXPANSION = NO
-EXPAND_ONLY_PREDEF = NO
+MACRO_EXPANSION = YES
+EXPAND_ONLY_PREDEF = YES
 SEARCH_INCLUDES = YES
 INCLUDE_PATH = 
 INCLUDE_FILE_PATTERNS = 
-PREDEFINED = __DOXYGEN__
+PREDEFINED = __DOXYGEN__ \
+             FLUIDSYNTH_API \
+             FLUID_DEPRECATED
 EXPAND_AS_DEFINED = 
 SKIP_FUNCTION_MACROS = YES
 #---------------------------------------------------------------------------